Software

R packages

deeptime


DOI CRAN status CRAN downloads

An R package that extends the functionality of other plotting packages like ggplot2 and lattice to help facilitate the plotting of data over long time intervals, including, but not limited to, geological, evolutionary, and ecological data. The primary goal of 'deeptime' is to enable users to add highly customizable timescales to their visualizations. Other functions are also included to assist with other areas of deep time visualization.

pal(a)eoverse


DOI CRAN status CRAN downloads

An R package developed by palaeobiologists, for palaeobiologists. The aim of palaeoverse is to generate a community-driven software package of generic functions for the palaeobiology community. The package does not provide implementations of statistical analyses, rather it provides auxiliary functions to help streamline analyses and improve code readability and reproducibility.

rphylopic


CRAN status CRAN downloads

An R package that allows users to add silhouettes of organisms from the PhyloPic website to plots generated in base R and ggplot2. rphylopic was originally developed and maintained by Scott Chamberlain. From ver. 1.0.0, the package is now developed and maintained by myself and Lewis A. Jones from the Palaeoverse team.

pcmtools


DOI

An R package that provides various tools to help with performing phylogenetic comparative methods and curating/visualizing the results.


Other software

ESP-Website

A website to help manage the logistics of large short-term educational programs, managed by Learning Unlimited. I make and manage contributions to the repository.

willgearty.github.io

The code that produces this website, hosted by Github.