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Changelog

Source: NEWS.md

deeptime 1.1.1

CRAN release: 2024-03-08

deeptime now requires rlang version 1.1.0 or higher. This patch version includes several bug fixes:

  • Fixed several cases where vignette and documentation building and/or unit testing would fail when the Macrostrat API was down
  • Fixed coord_geo_polar() and coord_geo_radial() when the r-axis has expansion (#60)
  • Improved argument type checking and error handling across the entire package

deeptime 1.1.0

CRAN release: 2024-03-05

deeptime now requires ggplot2 version 3.4.0 or higher. This version introduces several new features and bug fixes:

  • Added geom_points_range(), a function designed for visualizing temporal occurrence data
  • Added facet_grid_color() and facet_wrap_color() for changing strip background colors (#50)
  • Added coord_geo_radial(), an enhanced version of coord_geo_polar() (only works with ggplot2 version 3.5.0 and higher) (#56)
  • Added family and fontface arguments to coord_geo()
  • Added the ability to include interval labels with coord_geo_polar() (#48)
  • Fixed the interaction between coord_geo() and ggsave() (#49)
  • Fixed size = "auto" when center_end_labels = TRUE in coord_geo()
  • Updated several functions to work with ggplot2 version 3.5.0

Notable changes:

  • The names for the theme elements that are used for coord_geo_polar() are now prepended with “deeptime.” (e.g., deeptime.axis.line.r) (#51)
  • ggplot2 version 3.5.0 has broken several edge cases of coord_trans_xy(). See the documentation for more details. This will be fixed in a future deeptime release.

deeptime 1.0.1

CRAN release: 2023-02-16

  • Fixed the bounds of the Kungurian stage in the built-in stages data
  • Updated License to GPL >= 3
  • Changed tidyverse to dplyr and magrittr in Suggests and vignettes

deeptime 1.0.0

CRAN release: 2023-01-20

  • Updated built-in timescales to 2022/10 version of GTS
  • Added a geom for making phylomorphospaces
  • Added vignettes
  • Renamed getScaleData() to get_scale_data()
  • Soft deprecated gggeo_scale() and gggeo_scale_old()

deeptime 0.3.0

CRAN release: 2022-11-09

deeptime now requires ggplot2 version 3.3.0 or higher. Several new features and fixed compatibility with various ggplot2 versions.

  • Added coord_geo_polar(), for adding timescales to polar plots (#33)
  • Added color and fill discrete scales that use the GTS colors (#43)
  • Fixed coord_geo_polar() and coord_trans_xy() for ggplot2 version 3.4.0 (#44)
  • Fixed coord_geo() for ggplot2 version 3.4.0
  • Added tests for both ggplot2 version 3.3.6 and 3.4.0
  • Removed uses of getFromNamespace (#45)

deeptime 0.2.3

CRAN release: 2022-09-20

  • Updated built-in timescales to 2022/02 version of GTS
  • Better name handling and documentation for getScaleData() (#42)

deeptime 0.2.2

CRAN release: 2022-05-18

  • Skip tests when suggested packages are unavailable
  • Added the ability to specify label color (#40)

deeptime 0.2.1

CRAN release: 2022-01-10

Updated built-in timescales

  • Updated the built-in timescales using the Macrostrat API (#39)
  • Fixed CRAN checks when ggtree is missing (#38)

deeptime 0.2.0

CRAN release: 2021-09-02

Several new features and bug fixes.

  • coord_geo() now works with discrete axes (#32 and #35)
  • Fixed a bug that prevented the use of custom interval data
  • Added option to use ggfittext to automatically resize labels (#19)
  • Added coord_trans_flip() (#20)
  • Fixed axis labels for coord_trans_xy() (#36)
  • Added tests with testthat (#34)

deeptime 0.1.0

CRAN release: 2021-07-23

First minor release (released on CRAN!)

  • Fixed ability to use text transformations (from scales) in coord_geo() (#30)
  • Added automatic R CMD check Github Actions
  • Fixed S3 method consistency and other R CMD check warnings and notes
  • Fixed coord_geo() when axis breaks were reversed or NULL (#23 and #29)
  • Added packages from examples and README to Suggests

deeptime 0.0.6

Several bug fixes and minor features.

  • Added ability to specify a layout for ggarrange2() (#21)
  • Added ability to center labels for time intervals that are broken by axis limits (#18)
  • Fixed gggeo_scale() for ggplot2>=3.3.0 (#22)
  • Replaced README examples with examples using real data (#28)
  • Fixed using first letters for the pos argument
  • Fixed label order (#26)
  • Switched from Travis to Github Actions (#27)
  • Fixed handling of axis tick labels for coord_trans_xy (#31)

deeptime 0.0.5

Added coord_geo(), which is a coordinate system for ggplot2 that allows for adding highly customized timescales to ggplot objects. Both gggeo_scale() and gggeo_scale_old are preserved but will receive notably less maintenance moving forward.

deeptime 0.0.4

ggarrange2() now accepts geo_scale objects and other grobified ggplots

  • Fixed missing axes and axis titles

deeptime 0.0.3

Minor release for bug fixes

  • Added options to customize borders and line width
  • Fixed abbreviations for stages named “Series X” (#9)
  • Fixed scale when x-axis crosses 0 (#10, #12)
  • Preserve margins of original plots (#13)
  • Fixed scale for plots with multiple panels

deeptime 0.0.2

Complete redesign of gggeo_scale() that adds the scale outside of the plotting space using gtable. The old version of gggeo_scale() is preserved as gggeo_scale_old().

  • Can now pull timescales from the Macrostrat API (#8)

deeptime 0.0.1

First full release. Adds scale onto the bottom of a ggplot.

  • Depends on R>3.4 (#1)
  • Fixed adding scales to faceted plots (#2)
  • Added timescale data from PBDB API (#3)
  • Fixed the use of ggtree when a geom has its own data (#5)
  • Fixed the stacking of multiple scales (#6)
  • Fixed documentation spelling (#7)